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ICDT
2010
ACM
137views Database» more  ICDT 2010»
15 years 5 months ago
A Greedy Algorithm for Constructing a Low-Width Generalized Hypertree Decomposition
We propose a greedy algorithm which, given a hypergraph H and a positive integer k, produces a hypertree decomposition of width less than or equal to 3k −1, or determines that H...
Kaoru Katayama, Tatsuro Okawara, Yuka Itou
GIS
2008
ACM
16 years 7 months ago
Geospatial information integration based on the conceptualization of geographic domain
Geospatial information integration is not a trivial task. An integrated view must be able to describe various heterogeneous data sources and its interrelation to obtain shared con...
Miguel Torres, Serguei Levachkine, Rolando Quinter...
BMCBI
2010
150views more  BMCBI 2010»
15 years 6 months ago
AMS 3.0: prediction of post-translational modifications
Background: We present here the recent update of AMS algorithm for identification of post-translational modification (PTM) sites in proteins based only on sequence information, us...
Subhadip Basu, Dariusz Plewczynski
BMCBI
2008
132views more  BMCBI 2008»
15 years 6 months ago
SCOWLP classification: Structural comparison and analysis of protein binding regions
Background: Detailed information about protein interactions is critical for our understanding of the principles governing protein recognition mechanisms. The structures of many pr...
Joan Teyra, Maciej Paszkowski-Rogacz, Gerd Anders,...
JIB
2006
220views more  JIB 2006»
15 years 6 months ago
An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...