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» Design and Evaluation of a Knowledge Management System
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ISMB
1997
14 years 11 months ago
Standardized Representations of the Literature: Combining Diverse Sources of Ribosomal Data
We are building a knowledge base (KB) of published structural data on the 30s ribosomal subunit in prokaryotes. Our KB is distinguished by a standardized representation of biologi...
Russ B. Altman, Neil F. Abernethy, Richard O. Chen
BMCBI
2010
105views more  BMCBI 2010»
14 years 10 months ago
A knowledge-guided strategy for improving the accuracy of scoring functions in binding affinity prediction
Background: Current scoring functions are not very successful in protein-ligand binding affinity prediction albeit their popularity in structure-based drug designs. Here, we propo...
Tiejun Cheng, Zhihai Liu, Renxiao Wang
BMCBI
2008
135views more  BMCBI 2008»
14 years 10 months ago
Ab-origin: an enhanced tool to identify the sourcing gene segments in germline for rearranged antibodies
Background: In the adaptive immune system, variable regions of immunoglobulin (IG) are encoded by random recombination of variable (V), diversity (D), and joining (J) gene segment...
Xiaojing Wang, Di Wu, SiYuan Zheng, Jing Sun, Lin ...
IPM
2007
145views more  IPM 2007»
14 years 9 months ago
Text mining techniques for patent analysis
Patent documents contain important research results. However, they are lengthy and rich in technical terminology such that it takes a lot of human efforts for analyses. Automatic...
Yuen-Hsien Tseng, Chi-Jen Lin, Yu-I Lin
IM
2007
14 years 9 months ago
Cluster Generation and Labeling for Web Snippets: A Fast, Accurate Hierarchical Solution
This paper describes Armil, a meta-search engine that groups the web snippets returned by auxiliary search engines into disjoint labeled clusters. The cluster labels generated by A...
Filippo Geraci, Marco Pellegrini, Marco Maggini, F...