— A crucial part of any high-performance computing system is its interconnection network. In the OSMOSIS project, Corning and IBM are jointly developing a demonstrator interconne...
Graph theoretic problems are representative of fundamental computations in traditional and emerging scientific disciplines like scientific computing, computational biology and b...
We have designed a functional data-parallel language called BSML for programming bulk-synchronous parallel (BSP) algorithms. The execution time can be estimated and dead-locks and ...
Approximate string matching problem is a common and often repeated task in information retrieval and bioinformatics. This paper proposes a generic design of a programmable array p...
Panagiotis D. Michailidis, Konstantinos G. Margari...
Background: Biological sequence repeats arranged in tandem patterns are widespread in DNA and proteins. While many software tools have been designed to detect DNA tandem repeats (...