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» Design of DNA origami
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DAM
2006
61views more  DAM 2006»
14 years 9 months ago
On error-tolerant DNA screening
Given n clones with some positive ones, the problem of DNA screening is to identify all positive clones with a set of tests each on a subset of clones, called a pool and the outco...
Weili Wu, Yaochun Huang, Xiao Huang, Yingshu Li
BIB
2008
88views more  BIB 2008»
14 years 9 months ago
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
The Molecular Evolutionary Genetics Analysis (MEGA) software is a desktop application designed for comparative analysis of homologous gene sequences either from multigene families...
Sudhir Kumar, Masatoshi Nei, Joel Dudley, Koichiro...
BMCBI
2010
190views more  BMCBI 2010»
14 years 9 months ago
A parallel and incremental algorithm for efficient unique signature discovery on DNA databases
Background: DNA signatures are distinct short nucleotide sequences that provide valuable information that is used for various purposes, such as the design of Polymerase Chain Reac...
Hsiao Ping Lee, Tzu-Fang Sheu, Chuan Yi Tang
98
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BMCBI
2004
146views more  BMCBI 2004»
14 years 9 months ago
The InDeVal insertion/deletion evaluation tool: a program for finding target regions in DNA sequences and for aiding in sequence
Background: The program InDeVal was originally developed to help researchers find known regions of insertion/deletion activity (with the exception of isolated single-base indels) ...
Sierra D. Stoneberg Holt, Jason A. Holt
69
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INFOSCALE
2006
ACM
15 years 3 months ago
Scalable hardware accelerator for comparing DNA and protein sequences
Abstract— Comparing genetic sequences is a well-known problem in bioinformatics. Newly determined sequences are being compared to known sequences stored in databases in order to ...
Philippe Faes, Bram Minnaert, Mark Christiaens, Er...