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» Design tools for emerging technologies
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BIOCOMP
2007
15 years 3 months ago
xMAN: extreme MApping of oligoNucleotides
Background: The ability to rapidly map millions of oligonucleotide fragments to a reference genome is crucial to many high throughput genomic technologies. Results: We propose an ...
Wei Li, Jason S. Carroll, Myles Brown, X. Shirley ...
BMCBI
2010
148views more  BMCBI 2010»
15 years 2 months ago
Calling SNPs without a reference sequence
Background: The most common application for the next-generation sequencing technologies is resequencing, where short reads from the genome of an individual are aligned to a refere...
Aakrosh Ratan, Yu Zhang, Vanessa M. Hayes, Stephan...
BMCBI
2010
124views more  BMCBI 2010»
15 years 2 months ago
A factor model to analyze heterogeneity in gene expression
Background: Microarray technology allows the simultaneous analysis of thousands of genes within a single experiment. Significance analyses of transcriptomic data ignore the gene d...
Yuna Blum, Guillaume Le Mignon, Sandrine Lagarrigu...
WWW
2009
ACM
16 years 2 months ago
Rapid development of spreadsheet-based web mashups
The rapid growth of social networking sites and web communities have motivated web sites to expose their APIs to external developers who create mashups by assembling existing func...
Woralak Kongdenfha, Boualem Benatallah, Julien Vay...
WWW
2006
ACM
16 years 2 months ago
Large-scale text categorization by batch mode active learning
Large-scale text categorization is an important research topic for Web data mining. One of the challenges in large-scale text categorization is how to reduce the amount of human e...
Steven C. H. Hoi, Rong Jin, Michael R. Lyu