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IPPS
2002
IEEE
15 years 9 months ago
Massively Parallel Solutions for Molecular Sequence Analysis
In this paper we present new approaches to high performance protein database scanning on two novel massively parallel architectures to gain supercomputer power at low cost. The ï¬...
Bertil Schmidt, Heiko Schröder, Manfred Schim...
HPDC
2010
IEEE
15 years 5 months ago
LogGOPSim: simulating large-scale applications in the LogGOPS model
We introduce LogGOPSim--a fast simulation framework for parallel algorithms at large-scale. LogGOPSim utilizes a slightly extended version of the well-known LogGPS model in combin...
Torsten Hoefler, Timo Schneider, Andrew Lumsdaine
IPSN
2010
Springer
15 years 11 months ago
Covering space for in-network sensor data storage
For in-network storage schemes, one maps data, indexed in a logical space, to the distributed sensor locations. When the physical sensor network has an irregular shape and possibl...
Rik Sarkar, Wei Zeng, Jie Gao, Xianfeng David Gu
ICPADS
2007
IEEE
15 years 11 months ago
Federated clusters using the transparent remote Execution (TREx) environment
- Due to the increasing complexity of scientific models, large-scale simulation tools often require a critical amount of computational power to produce results in a reasonable amou...
Richert Wang, Enrique Cauich, Isaac D. Scherson
HPDC
2008
IEEE
15 years 5 months ago
File grouping for scientific data management: lessons from experimenting with real traces
Abstract-The analysis of data usage in a large set of real traces from a high-energy physics collaboration revealed the existence of an emergent grouping of files that we coined &q...
Shyamala Doraimani, Adriana Iamnitchi