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» Designing Nucleotide Sequences for Computation: A Survey of ...
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CIE
2007
Springer
15 years 4 months ago
Computational Complexity of Constraint Satisfaction
Abstract. The input to a constraint satisfaction problem (CSP) consists of a set of variables, each with a domain, and constraints between these variables formulated by relations o...
Heribert Vollmer
BMCBI
2008
102views more  BMCBI 2008»
14 years 10 months ago
mtDNAmanager: a Web-based tool for the management and quality analysis of mitochondrial DNA control-region sequences
Background: For the past few years, scientific controversy has surrounded the large number of errors in forensic and literature mitochondrial DNA (mtDNA) data. However, recent res...
Hwan Young Lee, Injee Song, Eunho Ha, Sung-Bae Cho...
BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
Linear array of conserved sequence motifs to discriminate protein subfamilies: study on pyridine nucleotide-disulfide reductases
Background: The pyridine nucleotide disulfide reductase (PNDR) is a large and heterogeneous protein family divided into two classes (I and II), which reflect the divergent evoluti...
César L. Avila, Viviana A. Rapisarda, Ricar...
FCCM
2009
IEEE
169views VLSI» more  FCCM 2009»
15 years 4 months ago
RC-BLASTn: Implementation and Evaluation of the BLASTn Scan Function
BLASTn is a tool universally used by biologists to identify similarities between nucleotide based biological genome sequences. This report describes an FPGA based hardware impleme...
Siddhartha Datta, Parag Beeraka, Ron Sass
BMCBI
2004
136views more  BMCBI 2004»
14 years 9 months ago
A SNP-centric database for the investigation of the human genome
Background: Single Nucleotide Polymorphisms (SNPs) are an increasingly important tool for genetic and biomedical research. Although current genomic databases contain information o...
Alberto Riva, Isaac S. Kohane