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» Detecting False Matches in String Matching Algorithms
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BMCBI
2008
148views more  BMCBI 2008»
15 years 3 months ago
Discovering biclusters in gene expression data based on high-dimensional linear geometries
Background: In DNA microarray experiments, discovering groups of genes that share similar transcriptional characteristics is instrumental in functional annotation, tissue classifi...
Xiangchao Gan, Alan Wee-Chung Liew, Hong Yan
BMCBI
2007
166views more  BMCBI 2007»
15 years 3 months ago
Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
Background: In proteomic analysis, MS/MS spectra acquired by mass spectrometer are assigned to peptides by database searching algorithms such as SEQUEST. The assignations of pepti...
Xinning Jiang, Xiaogang Jiang, Guanghui Han, Mingl...
IANDC
2008
141views more  IANDC 2008»
15 years 3 months ago
Graph connectivity, partial words, and a theorem of Fine and Wilf
The problem of computing periods in words, or finite sequences of symbols from a finite alphabet, has important applications in several areas including data compression, string se...
Francine Blanchet-Sadri, Deepak Bal, Gautam Sisodi...
MICCAI
2006
Springer
16 years 3 months ago
A Landmark-Based Brain Conformal Parametrization with Automatic Landmark Tracking Technique
Abstract. In this paper, we present algorithms to automatically detect and match landmark curves on cortical surfaces to get an optimized brain conformal parametrization. First, we...
Lok Ming Lui, Yalin Wang, Tony F. Chan, Paul M. Th...
DSN
2007
IEEE
15 years 9 months ago
On the Quality of Service of Crash-Recovery Failure Detectors
In this paper, we study and model a crash-recovery target and its failure detector’s probabilistic behavior. We extend Quality of Service (QoS) metrics to measure the recovery d...
Tiejun Ma, Jane Hillston, Stuart Anderson