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» Detecting microRNA activity from gene expression data
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102
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BMCBI
2004
131views more  BMCBI 2004»
15 years 9 days ago
Alternative mapping of probes to genes for Affymetrix chips
Background: Short oligonucleotide arrays have several probes measuring the expression level of each target transcript. Therefore the selection of probes is a key component for the...
Laurent Gautier, Morten Møller, Lennart Fri...
121
Voted
BMCBI
2005
151views more  BMCBI 2005»
15 years 10 days ago
ProMiner: rule-based protein and gene entity recognition
Background: Identification of gene and protein names in biomedical text is a challenging task as the corresponding nomenclature has evolved over time. This has led to multiple syn...
Daniel Hanisch, Katrin Fundel, Heinz-Theodor Mevis...
128
Voted
BMCBI
2007
136views more  BMCBI 2007»
15 years 14 days ago
Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
Xiaoyu Chen, Mathieu Blanchette
109
Voted
GFKL
2004
Springer
137views Data Mining» more  GFKL 2004»
15 years 5 months ago
Density Estimation and Visualization for Data Containing Clusters of Unknown Structure
Abstract. A method for measuring the density of data sets that contain an unknown number of clusters of unknown sizes is proposed. This method, called Pareto Density Estimation (PD...
Alfred Ultsch
113
Voted
SIGMOD
2002
ACM
132views Database» more  SIGMOD 2002»
16 years 18 days ago
Clustering by pattern similarity in large data sets
Clustering is the process of grouping a set of objects into classes of similar objects. Although definitions of similarity vary from one clustering model to another, in most of th...
Haixun Wang, Wei Wang 0010, Jiong Yang, Philip S. ...