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» Detecting microRNA activity from gene expression data
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BMCBI
2007
97views more  BMCBI 2007»
15 years 17 days ago
A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, hu
Background: The Affymetrix GeneChip technology uses multiple probes per gene to measure its expression level. Individual probe signals can vary widely, which hampers proper interp...
Rudi Alberts, Peter Terpstra, Menno Hardonk, Leoni...
AMM
2011
118views more  AMM 2011»
14 years 7 months ago
From Community Detection to Mentor Selection in Rating-Free Collaborative Filtering
—The number of resources or items that users can now access when navigating on the Web or using e-services, is so huge that these might feel lost due to the presence of too much ...
Armelle Brun, Sylvain Castagnos, Anne Boyer
97
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BIBE
2006
IEEE
123views Bioinformatics» more  BIBE 2006»
15 years 6 months ago
Isolation and Visualization of Codon Usage Biases
While genomic sequencing projects have proved an abundant source of information for biological studies ranging from the molecular to the ecological in scale, much of the informati...
Douglas W. Raiford, Dan E. Krane, Travis E. Doom, ...
125
Voted
BMCBI
2005
107views more  BMCBI 2005»
15 years 10 days ago
A stepwise framework for the normalization of array CGH data
Background: In two-channel competitive genomic hybridization microarray experiments, the ratio of the two fluorescent signal intensities at each spot on the microarray is commonly...
Mehrnoush Khojasteh, Wan L. Lam, Rabab Kreidieh Wa...
BMCBI
2006
124views more  BMCBI 2006»
15 years 15 days ago
Predicting transcription factor binding sites using local over-representation and comparative genomics
Background: Identifying cis-regulatory elements is crucial to understanding gene expression, which highlights the importance of the computational detection of overrepresented tran...
Matthieu Defrance, Hélène Touzet