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BMCBI
2008
122views more  BMCBI 2008»
14 years 9 months ago
Effects of dependence in high-dimensional multiple testing problems
Background: We consider effects of dependence among variables of high-dimensional data in multiple hypothesis testing problems, in particular the False Discovery Rate (FDR) contro...
Kyung In Kim, Mark A. van de Wiel
SIGSOFT
2005
ACM
15 years 3 months ago
PR-Miner: automatically extracting implicit programming rules and detecting violations in large software code
Programs usually follow many implicit programming rules, most of which are too tedious to be documented by programmers. When these rules are violated by programmers who are unawar...
Zhenmin Li, Yuanyuan Zhou
BMCBI
2010
112views more  BMCBI 2010»
14 years 9 months ago
SeqAnt: A web service to rapidly identify and annotate DNA sequence variations
Background: The enormous throughput and low cost of second-generation sequencing platforms now allow research and clinical geneticists to routinely perform single experiments that...
Amol Carl Shetty, Prashanth Athri, Kajari Mondal, ...
BMCBI
2007
158views more  BMCBI 2007»
14 years 9 months ago
Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries
Background: The joint analysis of several categorical variables is a common task in many areas of biology, and is becoming central to systems biology investigations whose goal is ...
Corinne Dahinden, Giovanni Parmigiani, Mark C. Eme...
BMCBI
2005
92views more  BMCBI 2005»
14 years 9 months ago
FIGENIX: Intelligent automation of genomic annotation: expertise integration in a new software platform
Background: Two of the main objectives of the genomic and post-genomic era are to structurally and functionally annotate genomes which consists of detecting genes' position a...
Philippe Gouret, Vérane Vitiello, Nathalie ...