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    BMCBI
    2006
    157views more  BMCBI 2006»
    Comparison of protein interaction networks reveals species conservation and divergence
    14 years 9 months ago
    Comparison of protein interaction networks reveals species conservation and divergence
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    Background: Recent progresses in high-throughput proteomics have provided us with a first chance to characterize protein interaction networks (PINs), but also raised new challenge...
    Zhi Liang, Meng Xu, Maikun Teng, Liwen Niu
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    BIOCOMP
    2008
    135views Bioinformatics» more  BIOCOMP 2008»
    Prediction of Protein Function Using Graph Container and Message Passing
    14 years 11 months ago
    Prediction of Protein Function Using Graph Container and Message Passing
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    We introduce a novel parameter called container flux, which is used to measure the information sharing capacity between two distinct nodes in a graph. Other useful information, bot...
    Hongbo Zhou, Qiang Shawn Cheng, Mehdi Zargham
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    BMCBI
    2008
    118views more  BMCBI 2008»
    Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
    14 years 9 months ago
    Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
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    Background: The detection of conserved motifs in promoters of orthologous genes (phylogenetic footprints) has become a common strategy to predict cis-acting regulatory elements. S...
    Rekin's Janky, Jacques van Helden
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    BMCBI
    2010
    107views more  BMCBI 2010»
    Detection of characteristic sub pathway network for angiogenesis based on the comprehensive pathway network
    14 years 9 months ago
    Detection of characteristic sub pathway network for angiogenesis based on the comprehensive pathway network
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    Background: Pathways in biological system often cooperate with each other to function. Changes of interactions among pathways tightly associate with alterations in the properties ...
    Yezhou Huang, Shao Li
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    BMCBI
    2005
    198views more  BMCBI 2005»
    Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
    14 years 9 months ago
    Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
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    Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
    Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
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