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BMCBI
2007
126views more  BMCBI 2007»
15 years 4 months ago
High-throughput identification of interacting protein-protein binding sites
Background: With the advent of increasing sequence and structural data, a number of methods have been proposed to locate putative protein binding sites from protein surfaces. Ther...
Jo-Lan Chung, Wei Wang, Philip E. Bourne
BMCBI
2008
138views more  BMCBI 2008»
15 years 4 months ago
CASCADE: a novel quasi all paths-based network analysis algorithm for clustering biological interactions
Background: Quantitative characterization of the topological characteristics of protein-protein interaction (PPI) networks can enable the elucidation of biological functional modu...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
BMCBI
2010
88views more  BMCBI 2010»
15 years 4 months ago
Proteome scanning to predict PDZ domain interactions using support vector machines
Background: PDZ domains mediate protein-protein interactions involved in important biological processes through the recognition of short linear motifs in their target proteins. Tw...
Shirley Hui, Gary D. Bader
CN
2008
110views more  CN 2008»
15 years 4 months ago
The eternal sunshine of the sketch data structure
In the past years there has been significant research on developing compact data structures for summarizing large data streams. A family of such data structures is the so-called s...
Xenofontas A. Dimitropoulos, Marc Ph. Stoecklin, P...
BMCBI
2006
160views more  BMCBI 2006»
15 years 4 months ago
MIMAS: an innovative tool for network-based high density oligonucleotide microarray data management and annotation
Background: The high-density oligonucleotide microarray (GeneChip) is an important tool for molecular biological research aiming at large-scale detection of small nucleotide polym...
Leandro Hermida, Olivier Schaad, Philippe Demougin...
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