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    BMCBI
    2005
    144views more  BMCBI 2005»
    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
    14 years 9 months ago
    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
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    Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
    Scott L. Carter, Aron C. Eklund, Brigham H. Mecham...
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    BMCBI
    2004
    154views more  BMCBI 2004»
    Accuracy of cDNA microarray methods to detect small gene expression changes induced by neuregulin on breast epithelial cells
    14 years 9 months ago
    Accuracy of cDNA microarray methods to detect small gene expression changes induced by neuregulin on breast epithelial cells
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    Background: cDNA microarrays are a powerful means to screen for biologically relevant gene expression changes, but are often limited by their ability to detect small changes accur...
    Bin Yao, Sanjay N. Rakhade, Qunfang Li, Sharlin Ah...
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    ALMOB
    2007
    73views more  ALMOB 2007»
    GOGOT: a method for the identification of differentially expressed fragments from cDNA-AFLP data
    14 years 9 months ago
    GOGOT: a method for the identification of differentially expressed fragments from cDNA-AFLP data
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    Background: One-dimensional (1-D) electrophoretic data obtained using the cDNA-AFLP method have attracted great interest for the identification of differentially expressed transcr...
    Koji Kadota, Ryoko Araki, Yuji Nakai, Masumi Abe
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    BMCBI
    2005
    113views more  BMCBI 2005»
    Normal uniform mixture differential gene expression detection for cDNA microarrays
    14 years 9 months ago
    Normal uniform mixture differential gene expression detection for cDNA microarrays
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    Background: One of the primary tasks in analysing gene expression data is finding genes that are differentially expressed in different samples. Multiple testing issues due to the ...
    Nema Dean, Adrian E. Raftery
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    BMCBI
    2008
    126views more  BMCBI 2008»
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    14 years 9 months ago
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
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    Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
    Katerina Kechris, Hao Li
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