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145
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BMCBI
2008
108views more  BMCBI 2008»
15 years 3 months ago
An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance
Background: Motif finding algorithms have developed in their ability to use computationally efficient methods to detect patterns in biological sequences. However the posterior cla...
Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arl...
154
Voted
BMCBI
2006
213views more  BMCBI 2006»
15 years 3 months ago
CoXpress: differential co-expression in gene expression data
Background: Traditional methods of analysing gene expression data often include a statistical test to find differentially expressed genes, or use of a clustering algorithm to find...
Michael Watson
141
Voted
JCC
2008
195views more  JCC 2008»
15 years 3 months ago
pyVib, a computer program for the analysis of infrared and Raman optical activity
: A new program called pyVib has been developed as a tool for the analysis of Gaussian (Gaussian 03, Gaussian Inc., Pittsburgh, PA) outputs of vibrational absorption (IR), Raman as...
Mohamed Zerara
166
Voted
BMCBI
2004
177views more  BMCBI 2004»
15 years 3 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
145
Voted
JASIS
2000
143views more  JASIS 2000»
15 years 3 months ago
Discovering knowledge from noisy databases using genetic programming
s In data mining, we emphasize the need for learning from huge, incomplete and imperfect data sets (Fayyad et al. 1996, Frawley et al. 1991, Piatetsky-Shapiro and Frawley, 1991). T...
Man Leung Wong, Kwong-Sak Leung, Jack C. Y. Cheng