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BMCBI
2008
86views more  BMCBI 2008»
14 years 9 months ago
Subfamily specific conservation profiles for proteins based on n-gram patterns
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
John K. Vries, Xiong Liu
BMCBI
2008
166views more  BMCBI 2008»
14 years 9 months ago
Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual informa
Background: Probability based statistical learning methods such as mutual information and Bayesian networks have emerged as a major category of tools for reverse engineering mecha...
Weijun Luo, Kurt D. Hankenson, Peter J. Woolf
99
Voted
TCBB
2008
126views more  TCBB 2008»
14 years 9 months ago
Graphical Models of Residue Coupling in Protein Families
Abstract-- Many statistical measures and algorithmic techniques have been proposed for studying residue coupling in protein families. Generally speaking, two residue positions are ...
John Thomas, Naren Ramakrishnan, Chris Bailey-Kell...
SIAMNUM
2010
126views more  SIAMNUM 2010»
14 years 4 months ago
Smoothing under Diffeomorphic Constraints with Homeomorphic Splines
In this paper we introduce a new class of diffeomorphic smoothers based on general spline smoothing techniques and on the use of some tools that have been recently developed in th...
Jérémie Bigot, Sébastien Gada...
OOPSLA
1999
Springer
15 years 1 months ago
Detecting Defects in Object-Oriented Designs: Using Reading Techniques to Increase Software Quality
Inspections can be used to identify defects in software artifacts. In this way, inspection methods help to improve software quality, especially when used early in software develop...
Guilherme Travassos, Forrest Shull, Michael Freder...