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BMCBI
2007
130views more  BMCBI 2007»
13 years 6 months ago
Differential analysis for high density tiling microarray data
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
BMCBI
2010
130views more  BMCBI 2010»
13 years 6 months ago
Analysis of DNA strand-specific differential expression with high density tiling microarrays
Background: DNA microarray technology allows the analysis of genome structure and dynamics at genome-wide scale. Expression microarrays (EMA) contain probes for annotated open rea...
Luis Quintales, Mar Sánchez, Francisco Ante...
BMCBI
2005
148views more  BMCBI 2005»
13 years 6 months ago
Nonparametric tests for differential gene expression and interaction effects in multi-factorial microarray experiments
Background: Numerous nonparametric approaches have been proposed in literature to detect differential gene expression in the setting of two user-defined groups. However, there is ...
Xin Gao, Peter X. K. Song
IDEAL
2007
Springer
14 years 15 days ago
Analysis of Tiling Microarray Data by Learning Vector Quantization and Relevance Learning
We apply learning vector quantization to the analysis of tiling microarray data. As an example we consider the classification of C. elegans genomic probes as intronic or exonic. T...
Michael Biehl, Rainer Breitling, Yang Li
BMCBI
2008
141views more  BMCBI 2008»
13 years 6 months ago
EzArray: A web-based highly automated Affymetrix expression array data management and analysis system
Background: Though microarray experiments are very popular in life science research, managing and analyzing microarray data are still challenging tasks for many biologists. Most m...
Yuerong Zhu, Yuelin Zhu, Wei Xu