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» Directionality in protein fold prediction
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CSB
2004
IEEE
116views Bioinformatics» more  CSB 2004»
15 years 1 months ago
In-Silico Prediction of Surface Residue Clusters for Enzyme-Substrate Specificity
One of the most remarkable properties of enzyme-substrate binding is the high substrate specificity among homologous enzymes. Identification of regions in enzymes that play an imp...
Gong-Xin Yu, Byung-Hoon Park, Praveen Chandramohan...
BMCBI
2011
14 years 4 months ago
MRCQuant- an accurate LC/MS relative isotopic quantification algorithm on TOF instruments
Background: Relative isotope abundance quantification, which can be used for peptide identification and differential peptide quantification, plays an important role in liquid chro...
William H. Haskins, Konstantinos Petritis, Jianqiu...
BMCBI
2007
129views more  BMCBI 2007»
14 years 9 months ago
Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach
Background: Incorrectly annotated sequence data are becoming more commonplace as databases increasingly rely on automated techniques for annotation. Hence, there is an urgent need...
Carson M. Andorf, Drena Dobbs, Vasant Honavar
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RECOMB
2007
Springer
15 years 10 months ago
Reconstructing the Topology of Protein Complexes
Abstract. Recent advances in high-throughput experimental techniques have enabled the production of a wealth of protein interaction data, rich in both quantity and variety. While t...
Allister Bernard, David S. Vaughn, Alexander J. Ha...
BMCBI
2007
102views more  BMCBI 2007»
14 years 9 months ago
A mixture of feature experts approach for protein-protein interaction prediction
High-throughput methods can directly detect the set of interacting proteins in yeast but the results are often incomplete and exhibit high false positive and false negative rates....
Yanjun Qi, Judith Klein-Seetharaman, Ziv Bar-Josep...