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» Directionality in protein fold prediction
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BMCBI
2007
104views more  BMCBI 2007»
14 years 9 months ago
Predicting active site residue annotations in the Pfam database
Background: Approximately 5% of Pfam families are enzymatic, but only a small fraction of the sequences within these families (<0.5%) have had the residues responsible for cata...
Jaina Mistry, Alex Bateman, Robert D. Finn
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BMCBI
2007
86views more  BMCBI 2007»
14 years 9 months ago
Tandem mass spectrometry data quality assessment by self-convolution
Background: Many algorithms have been developed for deciphering the tandem mass spectrometry (MS) data sets. They can be essentially clustered into two classes. The first performs...
Keng Wah Choo, Wai Mun Tham
ICCAD
2008
IEEE
153views Hardware» more  ICCAD 2008»
15 years 6 months ago
SPM management using Markov chain based data access prediction
— Leveraging the power of scratchpad memories (SPMs) available in most embedded systems today is crucial to extract maximum performance from application programs. While regular a...
Taylan Yemliha, Shekhar Srikantaiah, Mahmut T. Kan...
BMCBI
2006
200views more  BMCBI 2006»
14 years 9 months ago
Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data
Background: Numerous feature selection methods have been applied to the identification of differentially expressed genes in microarray data. These include simple fold change, clas...
Ian B. Jeffery, Desmond G. Higgins, Aedín C...
PAKDD
2004
ACM
131views Data Mining» more  PAKDD 2004»
15 years 2 months ago
A Tree-Based Approach to the Discovery of Diagnostic Biomarkers for Ovarian Cancer
Computational diagnosis of cancer is a classification problem, and it has two special requirements on a learning algorithm: perfect accuracy and small number of features used in t...
Jinyan Li, Kotagiri Ramamohanarao