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BMCBI
2006
153views more  BMCBI 2006»
14 years 11 months ago
The 3of5 web application for complex and comprehensive pattern matching in protein sequences
Background: The identification of patterns in biological sequences is a key challenge in genome analysis and in proteomics. Frequently such patterns are complex and highly variabl...
Markus Seiler, Alexander Mehrle, Annemarie Poustka...
CIKM
2011
Springer
13 years 11 months ago
Building directories for social tagging systems
Today, a number of algorithms exist for constructing tag hierarchies from social tagging data. While these algorithms were designed with ontological goals in mind, we know very li...
Denis Helic, Markus Strohmaier
BMCBI
2008
175views more  BMCBI 2008»
14 years 11 months ago
Synonym set extraction from the biomedical literature by lexical pattern discovery
Background: Although there are a large number of thesauri for the biomedical domain many of them lack coverage in terms and their variant forms. Automatic thesaurus construction b...
John McCrae, Nigel Collier
BMCBI
2008
130views more  BMCBI 2008»
14 years 11 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
SIGIR
2009
ACM
15 years 6 months ago
Temporal collaborative filtering with adaptive neighbourhoods
Recommender Systems, based on collaborative filtering (CF), aim to accurately predict user tastes, by minimising the mean error achieved on hidden test sets of user ratings, afte...
Neal Lathia, Stephen Hailes, Licia Capra