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    » Discovering gene annotations in biomedical text databases
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    BMCBI
    2008
    184views more  BMCBI 2008»
    Integrating protein-protein interactions and text mining for protein function prediction
    14 years 9 months ago
    Integrating protein-protein interactions and text mining for protein function prediction
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    Background: Functional annotation of proteins remains a challenging task. Currently the scientific literature serves as the main source for yet uncurated functional annotations, b...
    Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich...
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    BMCBI
    2005
    96views more  BMCBI 2005»
    Overview of BioCreAtIvE task 1B: normalized gene lists
    14 years 9 months ago
    Overview of BioCreAtIvE task 1B: normalized gene lists
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    Background: Our goal in BioCreAtIve has been to assess the state of the art in text mining, with emphasis on applications that reflect real biological applications, e.g., the cura...
    Lynette Hirschman, Marc E. Colosimo, Alexander A. ...
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    BMCBI
    2008
    139views more  BMCBI 2008»
    Abbreviation definition identification based on automatic precision estimates
    14 years 9 months ago
    Abbreviation definition identification based on automatic precision estimates
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    Background: The rapid growth of biomedical literature presents challenges for automatic text processing, and one of the challenges is abbreviation identification. The presence of ...
    Sunghwan Sohn, Donald C. Comeau, Won Kim, W. John ...
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    DIS
    2007
    Springer
    135views Theoretical Computer Science» more  DIS 2007»
    Literature-Based Discovery by an Enhanced Information Retrieval Model
    15 years 3 months ago
    Literature-Based Discovery by an Enhanced Information Retrieval Model
    Download  www.ai.cs.kobe-u.ac.jp
    The massive, ever-growing literature in life science makes it increasingly difficult for individuals to grasp all the information relevant to their interests. Since even experts’...
    Kazuhiro Seki, Javed Mostafa
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    BMCBI
    2008
    130views more  BMCBI 2008»
    A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
    14 years 9 months ago
    A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
    Download  www.biomedcentral.com
    Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
    Sheila Podell, Terry Gaasterland, Eric E. Allen
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