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BMCBI
2005
180views more  BMCBI 2005»
14 years 9 months ago
arrayCGHbase: an analysis platform for comparative genomic hybridization microarrays
Background: The availability of the human genome sequence as well as the large number of physically accessible oligonucleotides, cDNA, and BAC clones across the entire genome has ...
Björn Menten, Filip Pattyn, Katleen De Preter...
IUI
2010
ACM
14 years 11 months ago
Finding your way in a multi-dimensional semantic space with luminoso
We present Luminoso, a tool that helps researchers to visualize and understand a dimensionality-reduced semantic space by exploring it interactively. It also streamlines the proce...
Robert Speer, Catherine Havasi, K. Nichole Treadwa...
BMCBI
2005
118views more  BMCBI 2005»
14 years 9 months ago
Feature selection and classification for microarray data analysis: Evolutionary methods for identifying predictive genes
Background: In the clinical context, samples assayed by microarray are often classified by cell line or tumour type and it is of interest to discover a set of genes that can be us...
Thanyaluk Jirapech-Umpai, J. Stuart Aitken
BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
Clustering protein environments for function prediction: finding PROSITE motifs in 3D
Background: Structural genomics initiatives are producing increasing numbers of threedimensional (3D) structures for which there is little functional information. Structure-based ...
Sungroh Yoon, Jessica C. Ebert, Eui-Young Chung, G...
BMCBI
2010
113views more  BMCBI 2010»
14 years 9 months ago
Probabilistic Principal Component Analysis for Metabolomic Data
Background: Data from metabolomic studies are typically complex and high-dimensional. Principal component analysis (PCA) is currently the most widely used statistical technique fo...
Gift Nyamundanda, Lorraine Brennan, Isobel Claire ...