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113
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WWW
2008
ACM
15 years 21 days ago
Discovering co-located queries in geographic search logs
A geographic search request contains a query consisting of one or more keywords, and a search-location that the user searches for. In this paper, we study the problem of discoveri...
Xiangye Xiao, Longhao Wang, Xing Xie, Qiong Luo
88
Voted
ALMOB
2007
74views more  ALMOB 2007»
15 years 28 days ago
Evaluating deterministic motif significance measures in protein databases
Background: Assessing the outcome of motif mining algorithms is an essential task, as the number of reported motifs can be very large. Significance measures play a central role in...
Pedro Gabriel Ferreira, Paulo J. Azevedo
BMCBI
2008
110views more  BMCBI 2008»
15 years 28 days ago
Determining significance of pairwise co-occurrences of events in bursty sequences
Background: Event sequences where different types of events often occur close together arise, e.g., when studying potential transcription factor binding sites (TFBS, events) of ce...
Niina Haiminen, Heikki Mannila, Evimaria Terzi
118
Voted
BMCBI
2004
150views more  BMCBI 2004»
15 years 20 days ago
Cross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in Drosophila
Background: The discovery of cis-regulatory modules in metazoan genomes is crucial for understanding the connection between genes and organism diversity. It is important to quanti...
Saurabh Sinha, Mark D. Schroeder, Ulrich Unnerstal...
100
Voted
EDBT
2008
ACM
160views Database» more  EDBT 2008»
15 years 2 months ago
Taxonomy-superimposed graph mining
New graph structures where node labels are members of hierarchically organized ontologies or taxonomies have become commonplace in different domains, e.g., life sciences. It is a ...
Ali Cakmak, Gultekin Özsoyoglu