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» Discrete Simulations of Biochemical Dynamics
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BIOCOMP
2010
14 years 9 months ago
A Model Reduction Technique for Stochastic Biochemical Kinetics
Abstract-- Modeling the intermolecular reactions in a single cell is a critical problem in computational biology. Biochemical reaction systems often involve species in both low and...
Silvana Ilie, Ekaterina Kudashkina
AMC
2000
94views more  AMC 2000»
14 years 11 months ago
Elements of a theory of simulation II: sequential dynamical systems
We study a class of discrete dynamical systems that is motivated by the generic structure of simulations. The systems consist of the following data: (a) a
Christopher L. Barrett, Henning S. Mortveit, Chris...
MEMBRANE
2004
Springer
15 years 5 months ago
Evolution and Oscillation in P Systems: Applications to Biological Phenomena
Some computational aspects and behavioral patterns of P systems are considered, emphasizing dynamical properties that turn useful in characterizing the behavior of biological and b...
Vincenzo Manca, Luca Bianco, Federico Fontana
CEC
2010
IEEE
14 years 6 months ago
Parameter estimation with term-wise decomposition in biochemical network GMA models by hybrid regularized Least Squares-Particle
High-throughput analytical techniques such as nuclear magnetic resonance, protein kinase phosphorylation, and mass spectroscopic methods generate time dense profiles of metabolites...
Prospero C. Naval, Luis G. Sison, Eduardo R. Mendo...