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» Discrete profile comparison using information bottleneck
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103
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ALMOB
2008
112views more  ALMOB 2008»
14 years 11 months ago
Metabolite-based clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps
Background: One of the goals of global metabolomic analysis is to identify metabolic markers that are hidden within a large background of data originating from high-throughput ana...
Peter Meinicke, Thomas Lingner, Alexander Kaever, ...
BMCBI
2010
156views more  BMCBI 2010»
14 years 11 months ago
Global screening of potential Candida albicans biofilm-related transcription factors via network comparison
Background: Candida albicans is a commonly encountered fungal pathogen in humans. The formation of biofilm is a major virulence factor in C. albicans pathogenesis and is related t...
Yu-Chao Wang, Chung-Yu Lan, Wen-Ping Hsieh, Luis A...
BMCBI
2007
130views more  BMCBI 2007»
14 years 11 months ago
Exploiting residue-level and profile-level interface propensities for usage in binding sites prediction of proteins
Background: Recognition of binding sites in proteins is a direct computational approach to the characterization of proteins in terms of biological and biochemical function. Residu...
Qiwen Dong, Xiaolong Wang, Lei Lin, Yi Guan
93
Voted
QEST
2009
IEEE
15 years 6 months ago
On the Impact of Modelling Choices for Distributed Information Spread
—We consider a distributed shuffling algorithm for sharing data in a distributed network. Nodes executing the algorithm periodically contact each other and exchange data. The be...
Rena Bakhshi, Ansgar Fehnker
BMCBI
2008
160views more  BMCBI 2008»
14 years 11 months ago
Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'
Background: The variety of DNA microarray formats and datasets presently available offers an unprecedented opportunity to perform insightful comparisons of heterogeneous data. Cro...
Alexandre Kuhn, Ruth Luthi-Carter, Mauro Delorenzi