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» Discriminative Locality Alignment
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FOSSACS
2005
Springer
15 years 4 months ago
Foundations of Web Transactions
A timed extension of π-calculus with a transaction construct – the calculus webπ – is studied. The underlying model of webπ relies on networks of processes; time proceeds as...
Cosimo Laneve, Gianluigi Zavattaro
SSDBM
2005
IEEE
100views Database» more  SSDBM 2005»
15 years 4 months ago
An Information Theoretic Model for Database Alignment
As with many large organizations, the Government's data is split in many different ways and is collected at different times by different people. The resulting massive data he...
Patrick Pantel, Andrew Philpot, Eduard H. Hovy
NIPS
2004
15 years 17 days ago
Multiple Alignment of Continuous Time Series
Multiple realizations of continuous-valued time series from a stochastic process often contain systematic variations in rate and amplitude. To leverage the information contained i...
Jennifer Listgarten, Radford M. Neal, Sam T. Rowei...
BMCBI
2008
211views more  BMCBI 2008»
14 years 11 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
BMCBI
2011
14 years 2 months ago
Efficient alignment of pyrosequencing reads for re-sequencing applications
Background: Over the past few years, new massively parallel DNA sequencing technologies have emerged. These platforms generate massive amounts of data per run, greatly reducing th...
Francisco Fernandes, Paulo G. S. da Fonseca, Lu&ia...