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BMCBI
2010
144views more  BMCBI 2010»
14 years 11 months ago
Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data
Background: The investigation of plant genome structure and evolution requires comprehensive characterization of repetitive sequences that make up the majority of higher plant nuc...
Petr Novák, Pavel Neumann, Jirí Maca...
BMCBI
2007
104views more  BMCBI 2007»
14 years 11 months ago
TISs-ST: a web server to evaluate polymorphic translation initiation sites and their reflections on the secretory targets
Background: The nucleotide sequence flanking the translation initiation codon (start codon context) affects the translational efficiency of eukaryotic mRNAs, and may indicate the ...
Renato Vicentini, Marcelo Menossi
BMCBI
2007
134views more  BMCBI 2007»
14 years 11 months ago
PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results
Background: BLAST searches are widely used for sequence alignment. The search results are commonly adopted for various functional and comparative genomics tasks such as annotating...
Ji He, Xinbin Dai, Xuechun Zhao
BMCBI
2008
156views more  BMCBI 2008»
14 years 11 months ago
ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses
Background: A survey of microarray databases reveals that most of the repository contents and data models are heterogeneous (i.e., data obtained from different chip manufacturers)...
Todd H. Stokes, J. T. Torrance, Henry Li, May D. W...
CORR
2010
Springer
176views Education» more  CORR 2010»
14 years 11 months ago
Bus Protocols: MSC-Based Specifications and Translation into Program of Verification Tool for Formal Verification
Message Sequence Charts (MSCs) are an appealing visual formalism mainly used in the early stages of system design to capture the system requirements. However, if we move towards a...
Kamrul Hasan Talukder
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