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BMCBI
2004
323views more  BMCBI 2004»
14 years 9 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
IPPS
2010
IEEE
14 years 8 months ago
Acceleration of spiking neural networks in emerging multi-core and GPU architectures
Recently, there has been strong interest in large-scale simulations of biological spiking neural networks (SNN) to model the human brain mechanisms and capture its inference capabi...
Mohammad A. Bhuiyan, Vivek K. Pallipuram, Melissa ...
IPPS
2008
IEEE
15 years 4 months ago
Lattice Boltzmann simulation optimization on leading multicore platforms
We present an auto-tuning approach to optimize application performance on emerging multicore architectures. The methodology extends the idea of searchbased performance optimizatio...
Samuel Williams, Jonathan Carter, Leonid Oliker, J...
GECCO
2004
Springer
15 years 3 months ago
Evolved Motor Primitives and Sequences in a Hierarchical Recurrent Neural Network
This study describes how complex goal-directed behavior can evolve in a hierarchically organized recurrent neural network controlling a simulated Khepera robot. Different types of ...
Rainer W. Paine, Jun Tani
ISBRA
2010
Springer
15 years 4 months ago
Modeling without Borders: Creating and Annotating VCell Models Using the Web
Biological research is becoming increasingly complex and data-rich, with multiple public databases providing a variety of resources: hundreds of thousands of substances and interac...
Michael L. Blinov, Oliver Ruebenacker, James C. Sc...