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JUCS
2007
152views more  JUCS 2007»
15 years 4 months ago
The SEWASIE Network of Mediator Agents for Semantic Search
: Integration of heterogeneous information in the context of Internet becomes a key activity to enable a more organized and semantically meaningful access to data sources. As Inter...
Domenico Beneventano, Sonia Bergamaschi, Francesco...
BMCBI
2004
146views more  BMCBI 2004»
15 years 4 months ago
Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
Feng Gao, Barrett C. Foat, Harmen J. Bussemaker
BMCBI
2004
177views more  BMCBI 2004»
15 years 4 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
JCISE
2002
166views more  JCISE 2002»
15 years 4 months ago
The STEP Modular Architecture
The first Technical Note in this series [1] introduced the international standard ISO 10303, informally known as STEP (STandard for the Exchange of Product model data). Subsequent...
Allison Barnard Feeney
NAR
2007
95views more  NAR 2007»
15 years 4 months ago
VisANT 3.0: new modules for pathway visualization, editing, prediction and construction
With the integration of the KEGG and Predictome databases as well as two search engines for coexpressed genes/proteins using data sets obtained from the Stanford Microarray Databa...
Zhenjun Hu, David M. Ng, Takuji Yamada, Chunnuan C...