The Replica Exchange method is a popular approach for studying the folding thermodynamics of small to modest size proteins in explicit solvent, since it is easily parallelized. Ho...
Maria Eleftheriou, Aleksandr Rayshubskiy, Jed W. P...
We introduce VLADYMIR, a matrix library that permits the development of array-based code in C++. It is especially useful for numerical simulation tasks and parallelises automatical...
Abstract-- The development of high performance parallel applications for clusters is considered a complex task. This can happen because the influence of the execution environment a...
Lucas Mello Schnorr, Philippe Olivier Alexandre Na...
Performance models provide significant insight into the performance relationships between an application and the system used for execution. The major obstacle to developing perfor...
Valerie E. Taylor, Xingfu Wu, Jonathan Geisler, Ri...
Parallel volume rendering is one of the most efficient techniques to achieve real time visualization of large datasets by distributing the data and the rendering process over a c...