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95
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BMCBI
2007
103views more  BMCBI 2007»
15 years 22 days ago
Systems biology approach for mapping the response of human urothelial cells to infection by Enterococcus faecalis
Background: To better understand the response of urinary epithelial (urothelial) cells to Enterococcus faecalis, a uropathogen that exhibits resistance to multiple antibiotics, a ...
Mikhail G. Dozmorov, Kimberly D. Kyker, Ricardo Sa...
102
Voted
BMCBI
2007
122views more  BMCBI 2007»
15 years 22 days ago
Dissecting complex transcriptional responses using pathway-level scores based on prior information
Background: The genomewide pattern of changes in mRNA expression measured using DNA microarrays is typically a complex superposition of the response of multiple regulatory pathway...
Harmen J. Bussemaker, Lucas D. Ward, André ...
101
Voted
BMCBI
2007
128views more  BMCBI 2007»
15 years 22 days ago
Model order selection for bio-molecular data clustering
Background: Cluster analysis has been widely applied for investigating structure in bio-molecular data. A drawback of most clustering algorithms is that they cannot automatically ...
Alberto Bertoni, Giorgio Valentini
111
Voted
BMCBI
2007
177views more  BMCBI 2007»
15 years 22 days ago
Biowep: a workflow enactment portal for bioinformatics applications
Background: The huge amount of biological information, its distribution over the Internet and the heterogeneity of available software tools makes the adoption of new data integrat...
Paolo Romano 0001, Ezio Bartocci, Guglielmo Bertol...
97
Voted
BMCBI
2007
147views more  BMCBI 2007»
15 years 22 days ago
Comparative analysis of long DNA sequences by per element information content using different contexts
Background: Features of a DNA sequence can be found by compressing the sequence under a suitable model; good compression implies low information content. Good DNA compression mode...
Trevor I. Dix, David R. Powell, Lloyd Allison, Jul...
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