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» Drawing Phylogenetic Trees
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SAC
2006
ACM
15 years 5 months ago
Protein classification using transductive learning on phylogenetic profiles
Phylogenetic profiles of proteins − strings of ones and zeros encoding respectively the presence and absence of proteins in a group of genomes − have recently been used to iden...
Roger A. Craig, Li Liao
IJDMB
2007
110views more  IJDMB 2007»
14 years 11 months ago
Transductive learning with EM algorithm to classify proteins based on phylogenetic profiles
: Phylogenetic profiles of proteins  strings of ones and zeros encoding respectively the presence and absence of proteins in a group of genomes  have recently been used to id...
Roger A. Craig, Li Liao
ICCS
2004
Springer
15 years 5 months ago
An Incremental Editor for Dynamic Hierarchical Drawing of Trees
We present an incremental tree editor based on algorithms for manipulating shape functions. The tree layout is hierarchical, left-to-right. Nodes of variable size and shape are sup...
David Workman, Margaret Bernard, Steven Pothoven
ALGORITHMICA
2002
109views more  ALGORITHMICA 2002»
14 years 11 months ago
A Near-Linear Area Bound for Drawing Binary Trees
We present several simple methods to construct planar, strictly upward, strongly order-preserving, straight-line drawings of any n-node binary tree. In particular, it is shown that...
Timothy M. Chan
BMCBI
2008
125views more  BMCBI 2008»
14 years 12 months ago
A fast algorithm for the multiple genome rearrangement problem with weighted reversals and transpositions
Background: Due to recent progress in genome sequencing, more and more data for phylogenetic reconstruction based on rearrangement distances between genomes become available. Howe...
Martin Bader, Mohamed Ibrahim Abouelhoda, Enno Ohl...