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» Drawing Phylogenetic Trees
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GECCO
2006
Springer
132views Optimization» more  GECCO 2006»
15 years 3 months ago
The role of diverse populations in phylogenetic analysis
The most popular approaches for reconstructing phylogenetic trees attempt to solve NP-hard optimization criteria such as maximum parsimony (MP). Currently, the bestperforming heur...
Tiffani L. Williams, Marc L. Smith
MFCS
2005
Springer
15 years 5 months ago
Reconstructing an Ultrametric Galled Phylogenetic Network from a Distance Matrix
Abstract. Given a distance matrix M that specifies the pairwise evolutionary distances between n species, the phylogenetic tree reconstruction problem asks for an edge-weighted ph...
Ho-Leung Chan, Jesper Jansson, Tak Wah Lam, Siu-Mi...
CCECE
2006
IEEE
15 years 5 months ago
Dynamic and Parallel Approaches to Optimal Evolutionary Tree Construction
Phylogenetic trees are commonly reconstructed based on hard optimization problems such as Maximum parsimony (MP) and Maximum likelihood (ML). Conventional MP heuristics for produc...
Anupam Bhattacharjee, Kazi Zakia Sultana, Zalia Sh...
ISAAC
2005
Springer
113views Algorithms» more  ISAAC 2005»
15 years 5 months ago
Fast Algorithms for Computing the Tripartition-Based Distance Between Phylogenetic Networks
Consider two phylogenetic networks N and N′ of size n. The tripartition-based distance finds the proportion of tripartitions which are not shared by N and N′ . This distance i...
Nguyen Bao Nguyen, C. Thach Nguyen, Wing-Kin Sung
CCCG
2010
15 years 1 months ago
Minimum-area drawings of plane 3-trees
d Abstract) Debajyoti Mondal , Rahnuma Islam Nishat , Md. Saidur Rahman , and Muhammad Jawaherul Alam
Debajyoti Mondal, Rahnuma Islam Nishat, Md. Saidur...