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» Drawing Phylogenetic Trees
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ACSC
2007
IEEE
15 years 8 months ago
Compact Layout of Layered Trees
The standard layered drawing convention for trees in which the vertical placement of a node is given by its level in the tree and each node is centered between its children can le...
Kim Marriott, Peter Sbarski
BMEI
2008
IEEE
15 years 8 months ago
A New Approach for Tree Alignment Based on Local Re-Optimization
Multiple sequence alignment is the most fundamental task in bioinformatics and computational biology. In this paper, we present a new algorithm to conduct multiple sequences align...
Feng Yue, Jijun Tang
BMCBI
2008
86views more  BMCBI 2008»
15 years 2 months ago
Is plant mitochondrial RNA editing a source of phylogenetic incongruence? An answer from in silico and in vivo data sets
Background: In plant mitochondria, the post-transcriptional RNA editing process converts C to U at a number of specific sites of the mRNA sequence and usually restores phylogeneti...
Ernesto Picardi, Carla Quagliariello
COMGEO
2004
ACM
15 years 1 months ago
Proximity drawings in polynomial area and volume
We introduce a novel technique for drawing proximity graphs in polynomial area and volume. Previously known algorithms produce representations whose size increases exponentially w...
Paolo Penna, Paola Vocca
GD
2004
Springer
15 years 7 months ago
Really Straight Graph Drawings
We study straight-line drawings of graphs with few segments and few slopes. Optimal results are obtained for all trees. Tight bounds are obtained for outerplanar graphs, 2-trees, a...
Vida Dujmovic, Matthew Suderman, David R. Wood