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» Drawing Phylogenetic Trees
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RECOMB
2006
Springer
16 years 3 days ago
Maximal Accurate Forests from Distance Matrices
Abstract. We present a fast converging method for distance-based phylogenetic inference, which is novel in two respects. First, it is the only method (to our knowledge) to guarante...
Constantinos Daskalakis, Cameron Hill, Alexander J...
COMGEO
2012
ACM
13 years 7 months ago
Point-set embeddings of plane 3-trees
A straight-line drawing of a plane graph G is a planar drawing of G, where each vertex is drawn as a point and each edge is drawn as a straight line segment. Given a set S of n poi...
Rahnuma Islam Nishat, Debajyoti Mondal, Md. Saidur...
RECOMB
2008
Springer
16 years 3 days ago
A Phylogenetic Approach to Genetic Map Refinement
Following various genetic mapping techniques conducted on different segregating populations, one or more genetic maps are obtained for a given species. However, recombination analy...
Denis Bertrand, Mathieu Blanchette, Nadia El-Mabro...
ISBRA
2009
Springer
15 years 6 months ago
Untangling Tanglegrams: Comparing Trees by Their Drawings
A tanglegram is a pair of trees on the same set of leaves with matching leaves in the two trees joined by an edge. Tanglegrams are widely used in biology – to compare evolutiona...
Balaji Venkatachalam, Jim Apple, Katherine St. Joh...
EVOW
2009
Springer
15 years 6 months ago
A Memetic Algorithm for Phylogenetic Reconstruction with Maximum Parsimony
The Maximum Parsimony problem aims at reconstructing a phylogenetic tree from DNA, RNA or protein sequences while minimizing the number of evolutionary changes. Much work has been ...
Jean-Michel Richer, Adrien Goëffon, Jin-Kao H...