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» Drawing Phylogenetic Trees
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RECOMB
2005
Springer
16 years 4 days ago
Constructing a Smallest Refining Galled Phylogenetic Network
Reticulation events occur frequently in many types of species. Therefore, to develop accurate methods for reconstructing phylogenetic networks in order to describe evolutionary his...
Trinh N. D. Huynh, Jesper Jansson, Nguyen Bao Nguy...
GD
2005
Springer
15 years 5 months ago
Drawing Graphs Using Modular Decomposition
Abstract. In this paper we present an algorithm for drawing an undirected graph G which takes advantage of the structure of the modular decomposition tree of G. Specifically, our ...
Charis Papadopoulos, Constantinos Voglis
WEA
2010
Springer
476views Algorithms» more  WEA 2010»
15 years 6 months ago
Fast FPT Algorithms for Computing Rooted Agreement Forests: Theory and Experiments
We improve on earlier FPT algorithms for computing a rooted maximum agreement forest (MAF) or a maximum acyclic agreement forest (MAAF) of a pair of phylogenetic trees. Their sizes...
Chris Whidden, Robert G. Beiko, Norbert Zeh
BMCBI
2006
116views more  BMCBI 2006»
14 years 12 months ago
Whole genome association mapping by incompatibilities and local perfect phylogenies
Background: With current technology, vast amounts of data can be cheaply and efficiently produced in association studies, and to prevent data analysis to become the bottleneck of ...
Thomas Mailund, Søren Besenbacher, Mikkel H...
IPL
2006
72views more  IPL 2006»
14 years 11 months ago
Structure and linear time recognition of 3-leaf powers
A graph G is the k-leaf power of a tree T if its vertices are leaves of T such that two vertices are adjacent in G if and only if their distance in T is at most k. Then T is the k...
Andreas Brandstädt, Van Bang Le