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CORR
2010
Springer
164views Education» more  CORR 2010»
15 years 2 months ago
Schnyder decompositions for regular plane graphs and application to drawing
Schnyder woods are decompositions of simple triangulations into three edge-disjoint spanning trees crossing each other in a specific way. In this article, we define a generalizatio...
Olivier Bernardi, Éric Fusy
CLASSIFICATION
2006
78views more  CLASSIFICATION 2006»
15 years 2 months ago
Astrocladistics: A Phylogenetic Analysis of Galaxy Evolution II. Formation and Diversification of Galaxies
:This series of papers is intended to evaluate astrocladistics in reconstructing phylogenies of galaxies. The objective of this second paper is to formalize the concept of galaxy f...
Didier Fraix-Burnet, Philippe Choler, Emmanuel J. ...
GECCO
2005
Springer
100views Optimization» more  GECCO 2005»
15 years 7 months ago
Evolutionary tree genetic programming
We introduce a clustering-based method of subpopulation management in genetic programming (GP) called Evolutionary Tree Genetic Programming (ETGP). The biological motivation behin...
Ján Antolík, William H. Hsu
RECOMB
2008
Springer
16 years 2 months ago
Integrating Sequence and Topology for Efficient and Accurate Detection of Horizontal Gene Transfer
Abstract. One phylogeny-based approach to horizontal gene transfer (HGT) detection entails comparing the topology of a gene tree to that of the species tree, and using their differ...
Cuong Than, Guohua Jin, Luay Nakhleh
BMCBI
2010
135views more  BMCBI 2010»
15 years 2 months ago
MrsRF: an efficient MapReduce algorithm for analyzing large collections of evolutionary trees
Background: MapReduce is a parallel framework that has been used effectively to design largescale parallel applications for large computing clusters. In this paper, we evaluate th...
Suzanne Matthews, Tiffani L. Williams