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BMCBI
2007
167views more  BMCBI 2007»
14 years 9 months ago
A stochastic differential equation model for transcriptional regulatory networks
Background: This work explores the quantitative characteristics of the local transcriptional regulatory network based on the availability of time dependent gene expression data se...
Adriana Climescu-Haulica, Michelle D. Quirk
CIKM
2005
Springer
15 years 3 months ago
Compact reachability labeling for graph-structured data
Testing reachability between nodes in a graph is a well-known problem with many important applications, including knowledge representation, program analysis, and more recently, bi...
Hao He, Haixun Wang, Jun Yang 0001, Philip S. Yu
BMCBI
2008
121views more  BMCBI 2008»
14 years 9 months ago
BioSAVE: Display of scored annotation within a sequence context
Background: Visualization of sequence annotation is a common feature in many bioinformatics tools. For many applications it is desirable to restrict the display of such annotation...
Richard F. Pollock, Boris Adryan
SIGSOFT
2006
ACM
15 years 3 months ago
Bit level types for high level reasoning
Bitwise operations are commonly used in low-level systems code to access multiple data fields that have been packed into a single word. Program analysis tools that reason about s...
Ranjit Jhala, Rupak Majumdar
PLDI
2010
ACM
15 years 7 months ago
A Context-free Markup Language for Semi-structured Text
An ad hoc data format is any non-standard, semi-structured data format for which robust data processing tools are not available. In this paper, we present ANNE, a new kind of mark...
Qian Xi, David Walker