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EMSOFT
2007
Springer
15 years 3 months ago
Optimal task placement to improve cache performance
Most recent embedded systems use caches to improve their average performance. Current timing analyses are able to compute safe timing guarantees for these systems, if tasks are ru...
Gernot Gebhard, Sebastian Altmeyer
BMCBI
2005
132views more  BMCBI 2005»
14 years 9 months ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer
BMCBI
2007
176views more  BMCBI 2007»
14 years 9 months ago
Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
Background: Micro- and macroarray technologies help acquire thousands of gene expression patterns covering important biological processes during plant ontogeny. Particularly, fait...
Marc Strickert, Nese Sreenivasulu, Björn Usad...
PETRA
2009
ACM
15 years 4 months ago
Towards faster activity search using embedding-based subsequence matching
Event search is the problem of identifying events or activity of interest in a large database storing long sequences of activity. In this paper, our topic is the problem of identi...
Panagiotis Papapetrou, Paul Doliotis, Vassilis Ath...
ASPLOS
2009
ACM
15 years 10 months ago
RapidMRC: approximating L2 miss rate curves on commodity systems for online optimizations
Miss rate curves (MRCs) are useful in a number of contexts. In our research, online L2 cache MRCs enable us to dynamically identify optimal cache sizes when cache-partitioning a s...
David K. Tam, Reza Azimi, Livio Soares, Michael St...