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» Dynamic Programming and Graph Algorithms in Computer Vision
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ISMB
1997
15 years 4 months ago
Automated Alignment of RNA Sequences to Pseudoknotted Structures
Seq7 is a newprogramfor generating multiple structure-based alignments of RNAsequences. Byusing a variant of Dijkstra’s algorithm to find the shortest path through a specially c...
Jack E. Tabaska, Gary D. Stormo
ICPR
2000
IEEE
16 years 4 months ago
Piecewise Linear Skeletonization Using Principal Curves
We propose an algorithm to find piecewise linear skeletons of hand-written characters by using principal curves. The development of the method was inspired by the apparent similar...
Adam Krzyzak, Balázs Kégl
FPL
2010
Springer
188views Hardware» more  FPL 2010»
15 years 1 months ago
SeqHive: A Reconfigurable Computer Cluster for Genome Re-sequencing
We demonstrate how Field Programmable Gate Arrays (FPGAs) may be used to address the computing challenges associated with assembling genome sequences from recent ultra-high-through...
Kristian Stevens, Henry Chen, Terry Filiba, Peter ...
FSTTCS
2005
Springer
15 years 8 months ago
Reachability Analysis of Multithreaded Software with Asynchronous Communication
We introduce asynchronous dynamic pushdown networks (ADPN), a new model for multithreaded programs in which pushdown systems communicate via shared memory. ADPN generalizes both CP...
Ahmed Bouajjani, Javier Esparza, Stefan Schwoon, J...
ICWL
2004
Springer
15 years 8 months ago
Learning Algorithms with an Electronic Chalkboard over the Web
This paper describes a system for the animation of algorithms on an electronic chalkboard. The instructor teaching an algorithm can enter data directly through a drawing- the algor...
Margarita Esponda Argüero, Raúl Rojas