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» Dynamic simulation of regulatory networks using SQUAD
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HYBRID
2007
Springer
15 years 5 months ago
Model Checking Genetic Regulatory Networks with Parameter Uncertainty
The lack of precise numerical information for the values of biological parameters severely limits the development and analysis of models of genetic regulatory networks. To deal wit...
Grégory Batt, Calin Belta, Ron Weiss
ATVA
2008
Springer
131views Hardware» more  ATVA 2008»
15 years 1 months ago
Computation Tree Regular Logic for Genetic Regulatory Networks
Model checking has proven to be a useful analysis technique not only for concurrent systems, but also for the genetic regulatory networks (Grns) that govern the functioning of livi...
Radu Mateescu, Pedro T. Monteiro, Estelle Dumas, H...
BMCBI
2010
160views more  BMCBI 2010»
14 years 12 months ago
Quantitative model for inferring dynamic regulation of the tumour suppressor gene p53
Background: The availability of various "omics" datasets creates a prospect of performing the study of genomewide genetic regulatory networks. However, one of the major ...
Junbai Wang, Tianhai Tian
NIPS
2008
15 years 1 months ago
Non-stationary dynamic Bayesian networks
Abstract: Structure learning of dynamic Bayesian networks provide a principled mechanism for identifying conditional dependencies in time-series data. This learning procedure assum...
Joshua W. Robinson, Alexander J. Hartemink
BMCBI
2008
174views more  BMCBI 2008»
14 years 11 months ago
Evolutionary approaches for the reverse-engineering of gene regulatory networks: A study on a biologically realistic dataset
Background: Inferring gene regulatory networks from data requires the development of algorithms devoted to structure extraction. When only static data are available, gene interact...
Cédric Auliac, Vincent Frouin, Xavier Gidro...