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» Dynamic simulation of regulatory networks using SQUAD
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GLVLSI
2003
IEEE
175views VLSI» more  GLVLSI 2003»
15 years 5 months ago
A custom FPGA for the simulation of gene regulatory networks
We present a unique FPGA that uses a mix of digital and large-signal analog computation for the simulation of gene regulatory networks. The prototype IC consists of a 4x5 array of...
Ilias Tagkopoulos, Charles A. Zukowski, German Cav...
IDEAL
2004
Springer
15 years 5 months ago
Building Genetic Networks for Gene Expression Patterns
Building genetic regulatory networks from time series data of gene expression patterns is an important topic in bioinformatics. Probabilistic Boolean networks (PBNs) have been deve...
Wai-Ki Ching, Eric S. Fung, Michael K. Ng
APBC
2004
116views Bioinformatics» more  APBC 2004»
15 years 1 months ago
Evolving Genetic Regulatory Networks Using an Artificial Genome
Boolean models of genetic regulatory networks (GRNs) have been shown to exhibit many of the characteristic dynamics of real GRNs, with gene expression patterns settling to point a...
Jennifer Hallinan, Janet Wiles
TIT
2010
97views Education» more  TIT 2010»
14 years 6 months ago
Periodic orbits and equilibria in glass models for gene regulatory networks
Abstract--Glass models are frequently used to model gene regulatory networks. A distinct feature of the Glass model is that its dynamics can be formalized as paths through multi-di...
Igor Zinovik, Yury Chebiryak, Daniel Kroening
IGARSS
2009
14 years 9 months ago
Self-organising Sensor Web using Cell-Fate Optimisation
The Sensor Web as an open complex adaptive system exhibits many characteristic that are common to selforganising systems. One of the characteristics of the Sensor Web is that of s...
Terence L. van Zyl, Elizabeth Marie Ehlers