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» Edge and Node Searching Problems on Trees
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BMCBI
2008
139views more  BMCBI 2008»
14 years 9 months ago
A topological transformation in evolutionary tree search methods based on maximum likelihood combining p-ECR and neighbor joinin
Background: Inference of evolutionary trees using the maximum likelihood principle is NP-hard. Therefore, all practical methods rely on heuristics. The topological transformations...
Maozu Guo, Jian-Fu Li, Yang Liu
CORR
2010
Springer
149views Education» more  CORR 2010»
14 years 9 months ago
Pebbling and Branching Programs Solving the Tree Evaluation Problem
We study restricted computation models related to the tree evaluation problem. The TEP was introduced in earlier work as a simple candidate for the (very) long term goal of separa...
Dustin Wehr
ISAAC
2005
Springer
89views Algorithms» more  ISAAC 2005»
15 years 3 months ago
Multi-source Trees: Algorithms for Minimizing Eccentricity Cost Metrics
We consider generalizations of the k-source sum of vertex eccentricity problem (k-SVET) and the k-source sum of source eccentricity problem (k-SSET) [1], which we call SDET and SSE...
Paraskevi Fragopoulou, Stavros D. Nikolopoulos, Le...
TSP
2010
14 years 4 months ago
Learning Gaussian tree models: analysis of error exponents and extremal structures
The problem of learning tree-structured Gaussian graphical models from independent and identically distributed (i.i.d.) samples is considered. The influence of the tree structure a...
Vincent Y. F. Tan, Animashree Anandkumar, Alan S. ...
BMCBI
2006
161views more  BMCBI 2006»
14 years 9 months ago
A novel approach to phylogenetic tree construction using stochastic optimization and clustering
Background: The problem of inferring the evolutionary history and constructing the phylogenetic tree with high performance has become one of the major problems in computational bi...
Ling Qin, Yixin Chen, Yi Pan, Ling Chen