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ICPP
2007
IEEE
15 years 4 months ago
Efficient Parallel Algorithm for Optimal Three-Sequences Alignment
Sequence alignment is a fundamental problem in the computational biology. Many alignment methods have been proposed in the literature, such as pair-wise sequence alignment (2SA), ...
Chun-Yuan Lin, Chen Tai Huang, Yeh-Ching Chung, Ch...
AAIM
2010
Springer
181views Algorithms» more  AAIM 2010»
15 years 1 months ago
Efficient Exact and Approximate Algorithms for the Complement of Maximal Strip Recovery
Given two genomic maps G and H represented by a sequence of n gene markers, a strip (syntenic block) is a sequence of distinct markers of length at least two which appear as subseq...
Binhai Zhu
ICWS
2008
IEEE
14 years 11 months ago
An Efficient Syntactic Web Service Composition Algorithm Based on the Planning Graph Model
In this paper, we have studied a common Web service composition problem, the syntactic matching problem, where the output parameters of a Web service can be used as the input para...
Xianrong Zheng, Yuhong Yan
TCBB
2008
113views more  TCBB 2008»
14 years 9 months ago
Efficient Algorithms for the Computational Design of Optimal Tiling Arrays
The representation of a genome by oligonucleotide probes is a prerequisite for the analysis of many of its basic properties, such as transcription factor binding sites, chromosomal...
Alexander Schliep, Roland Krause
SDM
2008
SIAM
161views Data Mining» more  SDM 2008»
14 years 11 months ago
Efficient Maximum Margin Clustering via Cutting Plane Algorithm
Maximum margin clustering (MMC) is a recently proposed clustering method, which extends the theory of support vector machine to the unsupervised scenario and aims at finding the m...
Bin Zhao, Fei Wang, Changshui Zhang