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» Efficient Multidimensional Sampling
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BMCBI
2010
124views more  BMCBI 2010»
14 years 10 months ago
Estimating time since infection in early homogeneous HIV-1 samples using a poisson model
Background: The occurrence of a genetic bottleneck in HIV sexual or mother-to-infant transmission has been well documented. This results in a majority of new infections being homo...
Elena E. Giorgi, Bob Funkhouser, Gayathri Athreya,...
BMCBI
2008
135views more  BMCBI 2008»
14 years 10 months ago
Fregene: Simulation of realistic sequence-level data in populations and ascertained samples
Background: FREGENE simulates sequence-level data over large genomic regions in large populations. Because, unlike coalescent simulators, it works forwards through time, it allows...
Marc Chadeau-Hyam, Clive J. Hoggart, Paul F. O'Rei...
BMCBI
2011
14 years 4 months ago
Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling
Background: Molecular database search tools need statistical models to assess the significance for the resulting hits. In the classical approach one asks the question how probable...
Stefan Wolfsheimer, Inke Herms, Sven Rahmann, Alex...
SAC
2005
ACM
15 years 3 months ago
A hybrid approach for multiresolution modeling of large-scale scientific data
Simulations of complex scientific phenomena involve the execution of massively parallel computer programs. These simulation programs generate large-scale multidimensional data set...
Tina Eliassi-Rad, Terence Critchlow
CVPR
2008
IEEE
15 years 12 months ago
Efficient mean shift belief propagation for vision tracking
A mechanism for efficient mean-shift belief propagation (MSBP) is introduced. The novelty of our work is to use mean-shift to perform nonparametric mode-seeking on belief surfaces...
Minwoo Park, Yanxi Liu, Robert T. Collins