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IPPS
1999
IEEE
15 years 8 months ago
Large Scale Simulation of Parallel Molecular Dynamics
This paper aims to describe the implementation of TAKAKAW, an efficient parallel application for the simulation of molecular dynamics designed to handle large proteins in biology....
Pierre-Eric Bernard, Thierry Gautier, Denis Trystr...
IPPS
1998
IEEE
15 years 8 months ago
Caching-Efficient Multithreaded Fast Multiplication of Sparse Matrices
Several fast sequential algorithms have been proposed in the past to multiply sparse matrices. These algorithms do not explicitlyaddresstheimpactofcachingonperformance. We show th...
Peter Sulatycke, Kanad Ghose
IPPS
1998
IEEE
15 years 8 months ago
Automatic Differentiation for Message-Passing Parallel Programs
Many applications require the derivatives of functions defined by computer programs. Automatic differentiation (AD) is a means of developing code to compute the derivatives of com...
Paul D. Hovland, Christian H. Bischof
IEEEPACT
1998
IEEE
15 years 8 months ago
Athapascan-1: On-Line Building Data Flow Graph in a Parallel Language
In order to achieve practical efficient execution on a parallel architecture, a knowledge of the data dependencies related to the application appears as the key point for building...
François Galilée, Jean-Louis Roch, G...
AAAI
1997
15 years 5 months ago
Efficient Management of Very Large Ontologies
This paper describes an environment for supporting very large ontologies. The system can be used on single PCs, workstations, a cluster of workstations, and high-end parallel supe...
Kilian Stoffel, Merwyn G. Taylor, James A. Hendler