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» Efficient Parallel Hierarchical Clustering
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IJDMB
2007
114views more  IJDMB 2007»
14 years 9 months ago
A parallel edge-betweenness clustering tool for Protein-Protein Interaction networks
: The increasing availability of protein-protein interaction graphs (PPI) requires new efficient tools capable of extracting valuable biological knowledge from these networks. Amon...
Qiaofeng Yang, Stefano Lonardi
ISPDC
2007
IEEE
15 years 4 months ago
Towards Data Partitioning for Parallel Computing on Three Interconnected Clusters
We present a new data partitioning strategy for parallel computing on three interconnected clusters. This partitioning has two advantages over existing partitionings. First it can...
Brett A. Becker, Alexey L. Lastovetsky
IPPS
2003
IEEE
15 years 3 months ago
Task Pool Teams for Implementing Irregular Algorithms on Clusters of SMPs
The characteristics of irregular algorithms make a parallel implementation difficult, especially for PC clusters or clusters of SMPs. These characteristics may include an unpredi...
Judith Hippold, Gudula Rünger
ICPP
1999
IEEE
15 years 2 months ago
The Index-Permutation Graph Model for Hierarchical Interconnection Networks
In this paper, we present the index-permutation (IP) graph model, and apply it to the systematic development of efficient hierarchical networks. We derive several classes of inter...
Chi-Hsiang Yeh, Behrooz Parhami
DAC
2009
ACM
15 years 1 months ago
NUDA: a non-uniform debugging architecture and non-intrusive race detection for many-core
Traditional debug methodologies are limited in their ability to provide debugging support for many-core parallel programming. Synchronization problems or bugs due to race conditio...
Chi-Neng Wen, Shu-Hsuan Chou, Tien-Fu Chen, Alan P...