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WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
15 years 2 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
ESWA
2008
101views more  ESWA 2008»
14 years 9 months ago
Discovering during-temporal patterns (DTPs) in large temporal databases
Abstract Large temporal Databases (TDBs) usually contain a wealth of data about temporal events. Aimed at discovering temporal patterns with during relationship (during-temporal pa...
Li Zhang, Guoqing Chen, Tom Brijs, Xing Zhang
KDD
1997
ACM
213views Data Mining» more  KDD 1997»
15 years 1 months ago
A Probabilistic Approach to Fast Pattern Matching in Time Series Databases
Theproblemof efficiently and accurately locating patterns of interest in massivetimeseries data sets is an important and non-trivial problemin a wide variety of applications, incl...
Eamonn J. Keogh, Padhraic Smyth
ICDE
2002
IEEE
130views Database» more  ICDE 2002»
15 years 11 months ago
Structural Joins: A Primitive for Efficient XML Query Pattern Matching
XML queries typically specify patterns of selection predicates on multiple elements that have some specified tree structured relationships. The primitive tree structured relations...
Shurug Al-Khalifa, H. V. Jagadish, Jignesh M. Pate...
BMCBI
2006
145views more  BMCBI 2006»
14 years 9 months ago
Fast-Find: A novel computational approach to analyzing combinatorial motifs
Background: Many vital biological processes, including transcription and splicing, require a combination of short, degenerate sequence patterns, or motifs, adjacent to defined seq...
Micah Hamady, Erin Peden, Rob Knight, Ravinder Sin...