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120
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BMCBI
2008
211views more  BMCBI 2008»
15 years 17 days ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
JAVA
2001
Springer
15 years 4 months ago
Supporting dynamic parallel object arrays
We present efficient support for generalized arrays of parallel data driven objects. Array elements are regular C++ objects, and are scattered across the parallel machine. An indi...
Orion Sky Lawlor, Laxmikant V. Kalé
87
Voted
ASPLOS
2008
ACM
15 years 2 months ago
SoftSig: software-exposed hardware signatures for code analysis and optimization
Many code analysis techniques for optimization, debugging, or parallelization need to perform runtime disambiguation of sets of addresses. Such operations can be supported efficie...
James Tuck, Wonsun Ahn, Luis Ceze, Josep Torrellas
REFLECTION
1999
Springer
15 years 4 months ago
Metaprogramming Domain Specific Metaprograms
When a metaprogram automatically creates rules, some created rules are useless because they can never apply. Some metarules, that we call impossibility metarules, are used to remov...
Tristan Cazenave
120
Voted
ICIP
2001
IEEE
16 years 2 months ago
Prescient mode selection for robust video coding
In standard predictive video coders, intra-mode coding of macroblocks (MBs) provides packet loss resilience, at the cost of reduced compression efficiency. Conventional mode selec...
Rui Zhang, Shankar L. Regunathan, Kenneth Rose