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BMCBI
2008
142views more  BMCBI 2008»
14 years 9 months ago
Optimal neighborhood indexing for protein similarity search
Background: Similarity inference, one of the main bioinformatics tasks, has to face an exponential growth of the biological data. A classical approach used to cope with this data ...
Pierre Peterlongo, Laurent Noé, Dominique L...
EDBT
2006
ACM
120views Database» more  EDBT 2006»
15 years 9 months ago
Similarity Search on Time Series Based on Threshold Queries
Similarity search in time series data is required in many application fields. The most prominent work has focused on similarity search considering either complete time series or si...
Johannes Aßfalg, Hans-Peter Kriegel, Peer Kr...
ICDE
1999
IEEE
134views Database» more  ICDE 1999»
15 years 11 months ago
On Similarity-Based Queries for Time Series Data
We study similarity queries for time series data where similarity is defined in terms of a set of linear transformations on the Fourier series representation of a sequence. We hav...
Davood Rafiei
BMCBI
2004
162views more  BMCBI 2004»
14 years 9 months ago
Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant m
Background: Modern developmental biology relies heavily on the analysis of embryonic gene expression patterns. Investigators manually inspect hundreds or thousands of expression p...
Rajalakshmi Gurunathan, Bernard Van Emden, Sethura...
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SSDBM
2003
IEEE
141views Database» more  SSDBM 2003»
15 years 3 months ago
The ed-tree: An Index for Large DNA Sequence Databases
The growing interest in genomic research has caused an explosive growth in the size of DNA databases making it increasely challenging to perform searches on them. In this paper, w...
Zhenqiang Tan, Xia Cao, Beng Chin Ooi, Anthony K. ...